Ressources internes

• Github organisation : https://github.com/LBRAI2219-2024
• Ressources et instruction : https://github.com/LBRAI2219-2024/ressources
• Codes partagés : https://github.com/LBRAI2219-2024/codes_partages

Ressources externes

GRANAR

• Site web : https://granar.github.io/
• Code source : https://github.com/granar/granar
• Jupiter notebook : https://github.com/water-fluxes/day-2-organ-GRANAR
• Web application : https://plantmodelling.shinyapps.io/granar/
• Publication : https://doi.org/10.1104/pp.19.00617

MECHA

• Site web : https://mecharoot.github.io/
• Code source : https://github.com/MECHARoot/MECHA/releases/tag/1.0
• Jupiter notebook : https://github.com/water-fluxes/day-2-organ-MECHA
• Web application : https://plantmodelling.shinyapps.io/mecha/
• Publication : https://doi.org/10.1104/pp.18.01006

CPlantBox

• Site web : https://plant-root-soil-interactions-modelling.github.io/CRootBox/
• Code source : https://github.com/Plant-Root-Soil-Interactions-Modelling/CPlantBox
• Jupiter notebook : [https://github.com/water-fluxes/day-3-plant-scale-cplantbox](https://colab.research.google.com/github/Plant-Root-Soil-Interactions-Modelling/CPlantBox/blob/master/tutorial/jupyter/fspm_2023/1_cplantbox.ipynb)
• Web application : https://plantmodelling.shinyapps.io/shinyRootBox/
• PArameter database : https://figshare.com/collections/CRootBox_parameter_files/3745478
• Publication : https://doi.org/10.1101/139980

MARSHAL

• Site web : https://marshal-root.github.io/
• Code source : https://github.com/MARSHAL-ROOT/marshal
• Jupiter notebook : https://github.com/water-fluxes/day-3-plant-scale-marshal
• Web application : https://plantmodelling.shinyapps.io/marshal
• Publication : https://doi.org/10.1093/insilicoplants/diz012

SimpleCropBot

• Code source : https://github.com/plantmodelling/simplecropbot
• Web application : https://plantmodelling.shinyapps.io/SimpleCropBot/
• Publication : https://linkinghub.elsevier.com/retrieve/pii/S1364815214002102